平成29年度から数理物質科学研究科の工学系3専攻（電子・物理工学専攻、物性・分子工学専攻、物質・材料工学専攻）で開設する博士後期課程（履修期間3年）の教育プログラム。
共通科目 (Basic Subjects)
| 物性・分子工学インターンシップ I, II | Materials Science Internship I, II |
| 量子力学 I, II, III | Quantum Mechanics I, II, III |
| 電磁気学 I, II, III | Electromagnetism I,II,III |
| 統計力学 | Statistical Mechanics |
| 固体物理学 I, II, III | Solid State Physics I, II, III |
| 結晶回折論 | Diffraction Crystallography |
| 金属物性論 | Materials Engineering |
| 物質化学 | Materials Chemistry |
| 生体関連化学 | Chemical Biology |
| ナノテクノロジー特別講義 I, II | Special Lecture for Nanotechnology I, II |
専門科目 (Specialized subjects)
量子物性分野 (Quantum Physics of Solid State)
| 固体光物性論 | Optical Properties of Solids |
| 磁性・超伝導 I, II | Magnetism and Superconductivity I, II |
| 半導体工学特論 | Advanced Semiconductor Physics and Engineering |
| 凝縮系物理特論 | Advanced Condensed-Matter Physics |
| 誘電体工学特論 | Application of Dielectric Materials |
| 振動分光 | Vibrational Spectroscopy |
| 量子物性特別講義 | Advanced Quantum Physics of Solid State |
| 量子物性特別研究 I, II | Research in Quantum Physics of Solid State I, II |
量子理論分野 (Theoretical Quantum Physics)
| 固体物性論 | Quantum Theory for Materials Science |
| 物質の対称性と群論 | Group Theory in Atoms, Molecules, and Solids |
| 原子物理特論 | Advanced Atomic Physics |
| 量子理論特別研究 I, II | Research in Theoretical Quantum Physics I, II |
| 多粒子系の量子論 | Quantum Theory of Many-Particle Systems |
| 統計化学物理 | Statistical Processes in Chemical Physics |
| 強相関電子系の物理 | Physics of Strongly Correlated Electrons |
| 半導体光物性理論 | Quantum Theory of Semiconductor Optics |
| 量子状態制御論 | Theory of Quantum Measurement and Control |
| 電気伝導論 | Quantum Theory of Electric Current Generation |
材料物性分野 (Materials Physics and Engineering)
| 機能材料特論 | Advanced Intelligent Materials |
| ナノ構造材料論 | Physics of Nanostructured Materials |
| 電子顕微鏡特論 | Electron Microscopy |
| 物質応答論 | Response of Materials to Applied Fields |
| 機能性金属合成概論 | Introduction to Metallurgy for Advanced Materials and Instruments |
| 構造物性論 | Structural Materials Science |
| 材料物性工学特別講義 | Advanced Materials Science and Engineering |
| 材料物性特別研究 I, II | Research in Materials Physics and Engineering I, II |
物質化学・バイオ分野 (Chemistry and Engineering of Materials and Biomaterials)
| 化学・バイオセンシング工学 | Chemical/Bio-sensing Technology |
| 高分子化学 | Polymer Chemistry |
| 触媒化学特論 | Advanced Catalytic Chemistry |
| 有機機能材料論 | Organic Functional Materials |
| 生体材料科学特論 | Advanced Biomaterials science |
| 生体材料工学特論 | Advanced Biomaterials Engineering |
| 有機金属化学 | Organometallic Chemistry |
| 基礎物理化学概論 | Introduction of Physical Chemistry |
| 物質化学・バイオ特別研究 I, II | Research in Chemistry and Engineering of Materials and Biomaterials I, II |
物質・材料工学コース (NIMS Course)
| ナノ組織工学特論 III | Nanomaterials Ⅲ |
| 磁性・スピントロニクス | Magnetism and Spintronics |
| 表面物理・化学概論 | Introduction to Surface Physics |
| 材料の相変態 I, II | Phase Transformation in Materials I, II |
| 材料の力学的特性 | Mechanical Engineering of Materials |
| セラミックス科学 | Ceramic Science |
| 生体材料 | Biomaterials |
| ナノ組織工学特別セミナー | Seminar in Nanostructured Materials |
| ナノ組織工学特別研究 I, II | Research in Nanostructured Materials I, II |
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